Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.18■□□□□ 0.18
Rc3h1Q4VGL6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Gm11918-201ENSMUST00000121660 179 ntBASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rc3h1Q4VGL6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm15376-201ENSMUST00000122258 783 ntBASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm8584-201ENSMUST00000171982 758 ntBASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rc3h1Q4VGL6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rc3h1Q4VGL6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rc3h1Q4VGL6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Rc3h1Q4VGL6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Rc3h1Q4VGL6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rc3h1Q4VGL6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms