Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38aQ4FK66 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38aQ4FK66 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38aQ4FK66 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38aQ4FK66 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Prpf38aQ4FK66 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Gm29741-201ENSMUST00000192667 421 ntBASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.34■□□□□ 0.21
Prpf38aQ4FK66 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38aQ4FK66 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38aQ4FK66 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Prpf38aQ4FK66 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38aQ4FK66 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Prpf38aQ4FK66 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Prpf38aQ4FK66 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Gm28911-201ENSMUST00000188837 117 ntBASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Gm19078-201ENSMUST00000206311 727 ntBASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf38aQ4FK66 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Gm12134-201ENSMUST00000122109 520 ntBASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Gm18187-201ENSMUST00000196476 984 ntBASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf38aQ4FK66 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf38aQ4FK66 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms