Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Gm20482-202ENSMUST00000174729 825 ntBASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Fam196aQ3USH1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 Gm15782-201ENSMUST00000121073 445 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 Gm13786-201ENSMUST00000122371 333 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Gm25927-201ENSMUST00000175058 117 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 CT030182.1-201ENSMUST00000225935 533 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14□□□□□ -0.17
Fam196aQ3USH1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14□□□□□ -0.17
Fam196aQ3USH1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14□□□□□ -0.17
Fam196aQ3USH1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Gm15370-201ENSMUST00000117158 253 ntBASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Gm26927-201ENSMUST00000182385 965 ntBASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Gm6621-201ENSMUST00000193251 772 ntBASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Gm37986-201ENSMUST00000193285 383 ntBASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fam196aQ3USH1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms