Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Gm25925-201ENSMUST00000158314 306 ntBASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cks1brtQ3UNC9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Cks1brtQ3UNC9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Mir5130-201ENSMUST00000175160 84 ntBASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms