Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm13123-201ENSMUST00000122173 492 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.78□□□□□ -0.36
Spg11Q3UHA3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.77□□□□□ -0.36
Spg11Q3UHA3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Spg11Q3UHA3 Gm13611-201ENSMUST00000118269 318 ntBASIC12.77□□□□□ -0.37
Spg11Q3UHA3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Gm8885-201ENSMUST00000189382 598 ntBASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.77□□□□□ -0.37
Spg11Q3UHA3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm29155-201ENSMUST00000185910 269 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.76□□□□□ -0.37
Spg11Q3UHA3 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.76□□□□□ -0.37
Spg11Q3UHA3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms