Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccbe1Q3MI99 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccbe1Q3MI99 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gm14042-201ENSMUST00000120139 833 ntBASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gm9726-201ENSMUST00000180321 678 ntBASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gm34391-201ENSMUST00000203706 907 ntBASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccbe1Q3MI99 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccbe1Q3MI99 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms