Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tff1Q08423 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.68□□□□□ -0.54
Tff1Q08423 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tff1Q08423 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Gm5745-201ENSMUST00000183748 313 ntBASIC11.68□□□□□ -0.54
Tff1Q08423 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.68□□□□□ -0.54
Tff1Q08423 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.68□□□□□ -0.54
Tff1Q08423 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.68□□□□□ -0.54
Tff1Q08423 Gm45612-201ENSMUST00000211320 160 ntBASIC11.68□□□□□ -0.54
Tff1Q08423 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.68□□□□□ -0.54
Tff1Q08423 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.68□□□□□ -0.54
Tff1Q08423 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tff1Q08423 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Tff1Q08423 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.67□□□□□ -0.54
Tff1Q08423 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm14042-201ENSMUST00000120139 833 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.67□□□□□ -0.54
Tff1Q08423 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.67□□□□□ -0.54
Tff1Q08423 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Rprl2-201ENSMUST00000157150 290 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.67□□□□□ -0.54
Tff1Q08423 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Gm37230-201ENSMUST00000194491 818 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Gm43438-201ENSMUST00000198133 379 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm45747-201ENSMUST00000212203 999 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.67□□□□□ -0.54
Tff1Q08423 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.67□□□□□ -0.54
Tff1Q08423 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.67□□□□□ -0.54
Tff1Q08423 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Tff1Q08423 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tff1Q08423 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Tff1Q08423 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tff1Q08423 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tff1Q08423 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tff1Q08423 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tff1Q08423 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tff1Q08423 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms