Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.33□□□□□ -0.44
Thbs3Q05895 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.33□□□□□ -0.44
Thbs3Q05895 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Thbs3Q05895 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Thbs3Q05895 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Gm15460-201ENSMUST00000118147 391 ntBASIC12.32□□□□□ -0.44
Thbs3Q05895 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Gm15920-201ENSMUST00000118998 402 ntBASIC12.32□□□□□ -0.44
Thbs3Q05895 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Gm3436-201ENSMUST00000179930 840 ntBASIC12.32□□□□□ -0.44
Thbs3Q05895 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.32□□□□□ -0.44
Thbs3Q05895 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Thbs3Q05895 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Thbs3Q05895 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.31□□□□□ -0.44
Thbs3Q05895 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Gm38294-201ENSMUST00000192831 381 ntBASIC12.31□□□□□ -0.44
Thbs3Q05895 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.31□□□□□ -0.44
Thbs3Q05895 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.31□□□□□ -0.44
Thbs3Q05895 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.31□□□□□ -0.44
Thbs3Q05895 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Thbs3Q05895 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Thbs3Q05895 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Thbs3Q05895 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.3□□□□□ -0.44
Thbs3Q05895 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Thbs3Q05895 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Thbs3Q05895 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms