Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm18829-201ENSMUST00000188150 1622 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm8749-201ENSMUST00000117737 331 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm13059-201ENSMUST00000119881 398 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm25545-201ENSMUST00000122673 323 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm26927-201ENSMUST00000182385 965 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm37230-201ENSMUST00000194491 818 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm25131-201ENSMUST00000082653 151 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Col9a1Q05722 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.73□□□□□ -0.21
Col9a1Q05722 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.73□□□□□ -0.21
Col9a1Q05722 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col9a1Q05722 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Gm12001-201ENSMUST00000121727 913 ntBASIC13.72□□□□□ -0.21
Col9a1Q05722 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Gm26464-201ENSMUST00000157094 305 ntBASIC13.72□□□□□ -0.21
Col9a1Q05722 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.72□□□□□ -0.21
Col9a1Q05722 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.72□□□□□ -0.21
Col9a1Q05722 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC13.72□□□□□ -0.21
Col9a1Q05722 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col9a1Q05722 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Col9a1Q05722 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm17983-201ENSMUST00000190766 594 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm18660-201ENSMUST00000199542 629 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm6681-201ENSMUST00000205215 607 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Olfr286-202ENSMUST00000205305 969 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm10297-201ENSMUST00000207136 651 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm19189-201ENSMUST00000221689 754 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 AC154848.1-201ENSMUST00000225451 846 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.71□□□□□ -0.21
Col9a1Q05722 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Col9a1Q05722 Gm25517-201ENSMUST00000083865 134 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms