Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.25□□□□□ -0.13
Gabpb1Q00420 Gm6415-201ENSMUST00000118488 348 ntBASIC14.25□□□□□ -0.13
Gabpb1Q00420 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Gm28630-201ENSMUST00000187806 498 ntBASIC14.25□□□□□ -0.13
Gabpb1Q00420 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gabpb1Q00420 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Gm15653-201ENSMUST00000119247 907 ntBASIC14.24□□□□□ -0.13
Gabpb1Q00420 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Gm2445-201ENSMUST00000182798 989 ntBASIC14.24□□□□□ -0.13
Gabpb1Q00420 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gabpb1Q00420 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Gm14701-201ENSMUST00000117156 348 ntBASIC14.23□□□□□ -0.13
Gabpb1Q00420 Gm12428-201ENSMUST00000119844 727 ntBASIC14.23□□□□□ -0.13
Gabpb1Q00420 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.23□□□□□ -0.13
Gabpb1Q00420 Gm37714-201ENSMUST00000194742 342 ntBASIC14.23□□□□□ -0.13
Gabpb1Q00420 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.23□□□□□ -0.13
Gabpb1Q00420 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms