Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Gm18889-201ENSMUST00000174284 929 ntBASIC14.29□□□□□ -0.12
Thumpd3P97770 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Mir6990-201ENSMUST00000183724 91 ntBASIC14.29□□□□□ -0.12
Thumpd3P97770 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.29□□□□□ -0.12
Thumpd3P97770 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.29□□□□□ -0.12
Thumpd3P97770 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.29□□□□□ -0.12
Thumpd3P97770 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Thumpd3P97770 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Thumpd3P97770 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Thumpd3P97770 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Thumpd3P97770 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Thumpd3P97770 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Thumpd3P97770 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.28□□□□□ -0.12
Thumpd3P97770 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.28□□□□□ -0.12
Thumpd3P97770 Gm2272-201ENSMUST00000194903 582 ntBASIC14.28□□□□□ -0.12
Thumpd3P97770 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.28□□□□□ -0.12
Thumpd3P97770 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.28□□□□□ -0.12
Thumpd3P97770 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.28□□□□□ -0.12
Thumpd3P97770 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Thumpd3P97770 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.27□□□□□ -0.12
Thumpd3P97770 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Thumpd3P97770 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Thumpd3P97770 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.27□□□□□ -0.13
Thumpd3P97770 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Gm43474-201ENSMUST00000196415 774 ntBASIC14.27□□□□□ -0.13
Thumpd3P97770 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Thumpd3P97770 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Thumpd3P97770 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms