Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.27□□□□□ -0.29
Nkx3-2P97503 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Nkx3-2P97503 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Gm22189-201ENSMUST00000103822 86 ntBASIC13.26□□□□□ -0.29
Nkx3-2P97503 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx3-2P97503 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Carlr-201ENSMUST00000181515 2574 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Gm12585-201ENSMUST00000117307 290 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Nkx3-2P97503 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Gm28631-201ENSMUST00000190740 334 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.25□□□□□ -0.29
Nkx3-2P97503 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Matn2-206ENSMUST00000228570 2798 ntBASIC13.25□□□□□ -0.29
Nkx3-2P97503 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx3-2P97503 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx3-2P97503 Syt7-205ENSMUST00000224135 1557 ntBASIC13.24□□□□□ -0.29
Nkx3-2P97503 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms