Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim43bP86448 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim43bP86448 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim43bP86448 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.44□□□□□ -0.1
Trim43bP86448 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim43bP86448 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim43bP86448 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim43bP86448 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.43□□□□□ -0.1
Trim43bP86448 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim43bP86448 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43bP86448 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43bP86448 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43bP86448 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.43□□□□□ -0.1
Trim43bP86448 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43bP86448 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim43bP86448 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Olfr286-202ENSMUST00000205305 969 ntBASIC14.43□□□□□ -0.1
Trim43bP86448 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43bP86448 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43bP86448 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim43bP86448 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim43bP86448 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim43bP86448 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim43bP86448 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43bP86448 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Trim43bP86448 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Trim43bP86448 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim43bP86448 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim43bP86448 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim43bP86448 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.42□□□□□ -0.1
Trim43bP86448 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Gm2451-201ENSMUST00000199447 999 ntBASIC14.42□□□□□ -0.1
Trim43bP86448 Gm10290-201ENSMUST00000200451 999 ntBASIC14.42□□□□□ -0.1
Trim43bP86448 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim43bP86448 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trim43bP86448 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms