Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
H3f3aP84244 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.49□□□□□ -0.41
H3f3aP84244 Gm12585-201ENSMUST00000117307 290 ntBASIC12.49□□□□□ -0.41
H3f3aP84244 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.49□□□□□ -0.41
H3f3aP84244 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.49□□□□□ -0.41
H3f3aP84244 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
H3f3aP84244 Gm37714-201ENSMUST00000194742 342 ntBASIC12.49□□□□□ -0.41
H3f3aP84244 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H3f3aP84244 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.48□□□□□ -0.41
H3f3aP84244 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.48□□□□□ -0.41
H3f3aP84244 Gm27989-201ENSMUST00000184721 107 ntBASIC12.48□□□□□ -0.41
H3f3aP84244 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.48□□□□□ -0.41
H3f3aP84244 Gm18027-201ENSMUST00000218947 619 ntBASIC12.48□□□□□ -0.41
H3f3aP84244 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H3f3aP84244 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.48□□□□□ -0.41
H3f3aP84244 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
H3f3aP84244 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H3f3aP84244 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H3f3aP84244 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H3f3aP84244 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
H3f3aP84244 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.47□□□□□ -0.41
H3f3aP84244 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.47□□□□□ -0.41
H3f3aP84244 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.47□□□□□ -0.41
H3f3aP84244 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H3f3aP84244 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H3f3aP84244 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H3f3aP84244 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms