Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.77□□□□□ -0.53
SgcaP82350 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
SgcaP82350 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
SgcaP82350 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SgcaP82350 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.76□□□□□ -0.53
SgcaP82350 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.76□□□□□ -0.53
SgcaP82350 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SgcaP82350 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.76□□□□□ -0.53
SgcaP82350 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
SgcaP82350 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.76□□□□□ -0.53
SgcaP82350 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.76□□□□□ -0.53
SgcaP82350 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SgcaP82350 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SgcaP82350 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
SgcaP82350 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.75□□□□□ -0.53
SgcaP82350 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.75□□□□□ -0.53
SgcaP82350 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SgcaP82350 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SgcaP82350 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
SgcaP82350 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcaP82350 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.75□□□□□ -0.53
SgcaP82350 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.75□□□□□ -0.53
SgcaP82350 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.75□□□□□ -0.53
SgcaP82350 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.75□□□□□ -0.53
SgcaP82350 Gm18246-201ENSMUST00000221023 728 ntBASIC11.75□□□□□ -0.53
SgcaP82350 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.75□□□□□ -0.53
SgcaP82350 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SgcaP82350 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SgcaP82350 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms