Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Otx1P80205 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.08□□□□□ -0.48
Otx1P80205 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.08□□□□□ -0.48
Otx1P80205 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Otx1P80205 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.08□□□□□ -0.48
Otx1P80205 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.08□□□□□ -0.48
Otx1P80205 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.08□□□□□ -0.48
Otx1P80205 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Otx1P80205 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.08□□□□□ -0.48
Otx1P80205 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.08□□□□□ -0.48
Otx1P80205 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Otx1P80205 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.08□□□□□ -0.48
Otx1P80205 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Otx1P80205 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.08□□□□□ -0.48
Otx1P80205 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Otx1P80205 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.07□□□□□ -0.48
Otx1P80205 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Gm27680-201ENSMUST00000184192 160 ntBASIC12.07□□□□□ -0.48
Otx1P80205 Gm37714-201ENSMUST00000194742 342 ntBASIC12.07□□□□□ -0.48
Otx1P80205 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otx1P80205 Gm18027-201ENSMUST00000218947 619 ntBASIC12.07□□□□□ -0.48
Otx1P80205 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.07□□□□□ -0.48
Otx1P80205 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Otx1P80205 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otx1P80205 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otx1P80205 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Otx1P80205 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Otx1P80205 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Otx1P80205 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
Otx1P80205 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Otx1P80205 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.06□□□□□ -0.48
Otx1P80205 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Otx1P80205 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Otx1P80205 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otx1P80205 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Otx1P80205 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Otx1P80205 Mir1897-201ENSMUST00000122581 272 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms