Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.16■□□□□ 0.02
CiitaP79621 Mir7654-201ENSMUST00000185082 70 ntBASIC15.16■□□□□ 0.02
CiitaP79621 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Gm6745-201ENSMUST00000199216 526 ntBASIC15.16■□□□□ 0.02
CiitaP79621 Gm9908-201ENSMUST00000211534 448 ntBASIC15.16■□□□□ 0.02
CiitaP79621 Gm7653-201ENSMUST00000214567 508 ntBASIC15.16■□□□□ 0.02
CiitaP79621 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.16■□□□□ 0.02
CiitaP79621 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.16■□□□□ 0.02
CiitaP79621 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CiitaP79621 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.16■□□□□ 0.02
CiitaP79621 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CiitaP79621 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CiitaP79621 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CiitaP79621 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CiitaP79621 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CiitaP79621 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
CiitaP79621 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.15■□□□□ 0.02
CiitaP79621 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.15■□□□□ 0.02
CiitaP79621 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.15■□□□□ 0.02
CiitaP79621 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.15■□□□□ 0.02
CiitaP79621 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.15■□□□□ 0.02
CiitaP79621 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CiitaP79621 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CiitaP79621 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CiitaP79621 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CiitaP79621 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Gm15678-201ENSMUST00000117573 960 ntBASIC15.14■□□□□ 0.01
CiitaP79621 Gm12138-201ENSMUST00000122180 951 ntBASIC15.14■□□□□ 0.01
CiitaP79621 Gm12091-201ENSMUST00000146791 830 ntBASIC15.14■□□□□ 0.01
CiitaP79621 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.14■□□□□ 0.01
CiitaP79621 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.14■□□□□ 0.01
CiitaP79621 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CiitaP79621 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
CiitaP79621 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CiitaP79621 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CiitaP79621 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CiitaP79621 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CiitaP79621 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CiitaP79621 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms