Protein–RNA interactions for Protein: P70217

Hoxd13, Homeobox protein Hox-D13, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd13P70217 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxd13P70217 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.46□□□□□ -0.09
Hoxd13P70217 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxd13P70217 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Hoxd13P70217 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hoxd13P70217 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Mir6420-201ENSMUST00000185032 102 ntBASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm6983-201ENSMUST00000214912 628 ntBASIC14.45□□□□□ -0.1
Hoxd13P70217 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm6091-201ENSMUST00000098307 165 ntBASIC14.45□□□□□ -0.1
Hoxd13P70217 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.45□□□□□ -0.1
Hoxd13P70217 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Hoxd13P70217 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxd13P70217 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.44□□□□□ -0.1
Hoxd13P70217 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Gm45784-201ENSMUST00000188360 142 ntBASIC14.44□□□□□ -0.1
Hoxd13P70217 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.44□□□□□ -0.1
Hoxd13P70217 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.44□□□□□ -0.1
Hoxd13P70217 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxd13P70217 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxd13P70217 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd13P70217 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.43□□□□□ -0.1
Hoxd13P70217 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxd13P70217 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxd13P70217 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.43□□□□□ -0.1
Hoxd13P70217 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.43□□□□□ -0.1
Hoxd13P70217 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hoxd13P70217 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxd13P70217 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxd13P70217 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxd13P70217 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxd13P70217 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms