Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six5P70178 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six5P70178 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Six5P70178 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six5P70178 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six5P70178 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Six5P70178 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six5P70178 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six5P70178 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Six5P70178 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
Six5P70178 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Six5P70178 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Six5P70178 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Six5P70178 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Six5P70178 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.14□□□□□ -0.31
Six5P70178 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Six5P70178 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Six5P70178 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Six5P70178 Gm13453-201ENSMUST00000118708 357 ntBASIC13.14□□□□□ -0.31
Six5P70178 Gm15920-201ENSMUST00000118998 402 ntBASIC13.14□□□□□ -0.31
Six5P70178 Mir1897-201ENSMUST00000122581 272 ntBASIC13.14□□□□□ -0.31
Six5P70178 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.14□□□□□ -0.31
Six5P70178 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Six5P70178 Gm33320-201ENSMUST00000192232 530 ntBASIC13.14□□□□□ -0.31
Six5P70178 Gm6916-202ENSMUST00000205523 195 ntBASIC13.14□□□□□ -0.31
Six5P70178 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Gm44872-201ENSMUST00000207864 420 ntBASIC13.14□□□□□ -0.31
Six5P70178 Gm18027-201ENSMUST00000218947 619 ntBASIC13.14□□□□□ -0.31
Six5P70178 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.14□□□□□ -0.31
Six5P70178 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.14□□□□□ -0.31
Six5P70178 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Six5P70178 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.14□□□□□ -0.31
Six5P70178 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Six5P70178 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.13□□□□□ -0.31
Six5P70178 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six5P70178 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Six5P70178 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Six5P70178 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Six5P70178 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Six5P70178 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six5P70178 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.13□□□□□ -0.31
Six5P70178 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.13□□□□□ -0.31
Six5P70178 Gm3436-201ENSMUST00000179930 840 ntBASIC13.13□□□□□ -0.31
Six5P70178 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Gm27321-201ENSMUST00000185021 205 ntBASIC13.13□□□□□ -0.31
Six5P70178 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.13□□□□□ -0.31
Six5P70178 Gm44344-201ENSMUST00000200287 129 ntBASIC13.13□□□□□ -0.31
Six5P70178 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.13□□□□□ -0.31
Six5P70178 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six5P70178 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Six5P70178 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six5P70178 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.13□□□□□ -0.31
Six5P70178 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Six5P70178 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.12□□□□□ -0.31
Six5P70178 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six5P70178 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms