Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cks1bP61025 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.03□□□□□ -0.8
Cks1bP61025 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cks1bP61025 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.03□□□□□ -0.8
Cks1bP61025 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.03□□□□□ -0.8
Cks1bP61025 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Cks1bP61025 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cks1bP61025 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1bP61025 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.02□□□□□ -0.8
Cks1bP61025 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Cks1bP61025 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1bP61025 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.02□□□□□ -0.81
Cks1bP61025 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Cks1bP61025 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.02□□□□□ -0.81
Cks1bP61025 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Cks1bP61025 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.02□□□□□ -0.81
Cks1bP61025 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Gm7506-201ENSMUST00000207758 815 ntBASIC10.02□□□□□ -0.81
Cks1bP61025 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.02□□□□□ -0.81
Cks1bP61025 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.02□□□□□ -0.81
Cks1bP61025 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.02□□□□□ -0.81
Cks1bP61025 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.02□□□□□ -0.81
Cks1bP61025 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.02□□□□□ -0.81
Cks1bP61025 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cks1bP61025 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cks1bP61025 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1bP61025 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cks1bP61025 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cks1bP61025 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cks1bP61025 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1bP61025 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms