Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Gm12203-201ENSMUST00000118235 598 ntBASIC18.81■□□□□ 0.6
Nphp4P59240 Gm12209-201ENSMUST00000120089 596 ntBASIC18.81■□□□□ 0.6
Nphp4P59240 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.81■□□□□ 0.6
Nphp4P59240 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nphp4P59240 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.81■□□□□ 0.6
Nphp4P59240 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.81■□□□□ 0.6
Nphp4P59240 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Nphp4P59240 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nphp4P59240 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.8■□□□□ 0.6
Nphp4P59240 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.8■□□□□ 0.6
Nphp4P59240 Gm13392-201ENSMUST00000117708 150 ntBASIC18.8■□□□□ 0.6
Nphp4P59240 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Gm8062-201ENSMUST00000139696 444 ntBASIC18.8■□□□□ 0.6
Nphp4P59240 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC18.8■□□□□ 0.6
Nphp4P59240 Gm22331-201ENSMUST00000158066 136 ntBASIC18.8■□□□□ 0.6
Nphp4P59240 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nphp4P59240 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC18.8■□□□□ 0.6
Nphp4P59240 Gm27731-201ENSMUST00000185192 107 ntBASIC18.8■□□□□ 0.6
Nphp4P59240 Gm29649-201ENSMUST00000185649 419 ntBASIC18.8■□□□□ 0.6
Nphp4P59240 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC18.8■□□□□ 0.6
Nphp4P59240 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nphp4P59240 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC18.8■□□□□ 0.6
Nphp4P59240 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nphp4P59240 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Nphp4P59240 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC18.79■□□□□ 0.6
Nphp4P59240 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nphp4P59240 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Gm37424-201ENSMUST00000191727 561 ntBASIC18.79■□□□□ 0.6
Nphp4P59240 Gm9124-201ENSMUST00000191789 1092 ntBASIC18.79■□□□□ 0.6
Nphp4P59240 Gm9113-201ENSMUST00000192510 1018 ntBASIC18.79■□□□□ 0.6
Nphp4P59240 Gm9131-201ENSMUST00000193557 1089 ntBASIC18.79■□□□□ 0.6
Nphp4P59240 Gm9121-201ENSMUST00000193749 1071 ntBASIC18.79■□□□□ 0.6
Nphp4P59240 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nphp4P59240 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nphp4P59240 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nphp4P59240 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.78■□□□□ 0.6
Nphp4P59240 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Gm16177-201ENSMUST00000120728 718 ntBASIC18.78■□□□□ 0.6
Nphp4P59240 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Gm27514-201ENSMUST00000183692 110 ntBASIC18.78■□□□□ 0.6
Nphp4P59240 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC18.78■□□□□ 0.6
Nphp4P59240 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.78■□□□□ 0.6
Nphp4P59240 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nphp4P59240 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nphp4P59240 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nphp4P59240 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nphp4P59240 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nphp4P59240 Mir1938-201ENSMUST00000158746 100 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms