Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.35□□□□□ -0.11
Tubgcp3P58854 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tubgcp3P58854 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.34□□□□□ -0.11
Tubgcp3P58854 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm24158-201ENSMUST00000175263 71 ntBASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm27631-201ENSMUST00000184163 466 ntBASIC14.34□□□□□ -0.11
Tubgcp3P58854 AA619741-201ENSMUST00000195095 646 ntBASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm45453-201ENSMUST00000211758 853 ntBASIC14.34□□□□□ -0.11
Tubgcp3P58854 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.34□□□□□ -0.11
Tubgcp3P58854 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tubgcp3P58854 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubgcp3P58854 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Gm6736-201ENSMUST00000166583 948 ntBASIC14.33□□□□□ -0.12
Tubgcp3P58854 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubgcp3P58854 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Gm5566-201ENSMUST00000116118 459 ntBASIC14.32□□□□□ -0.12
Tubgcp3P58854 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Gm44608-201ENSMUST00000206827 855 ntBASIC14.32□□□□□ -0.12
Tubgcp3P58854 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tubgcp3P58854 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms