Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tpm1P58771 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.65■□□□□ 0.1
Tpm1P58771 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tpm1P58771 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tpm1P58771 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.65■□□□□ 0.1
Tpm1P58771 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.65■□□□□ 0.1
Tpm1P58771 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.65■□□□□ 0.1
Tpm1P58771 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.65■□□□□ 0.1
Tpm1P58771 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tpm1P58771 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Tpm1P58771 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.64■□□□□ 0.09
Tpm1P58771 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Tpm1P58771 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 Gm24589-201ENSMUST00000116692 94 ntBASIC15.64■□□□□ 0.09
Tpm1P58771 Gm13036-201ENSMUST00000117799 748 ntBASIC15.64■□□□□ 0.09
Tpm1P58771 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.64■□□□□ 0.09
Tpm1P58771 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 Gm45747-201ENSMUST00000212203 999 ntBASIC15.64■□□□□ 0.09
Tpm1P58771 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Tpm1P58771 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tpm1P58771 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Tpm1P58771 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Gm37230-201ENSMUST00000194491 818 ntBASIC15.63■□□□□ 0.09
Tpm1P58771 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.63■□□□□ 0.09
Tpm1P58771 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tpm1P58771 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tpm1P58771 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.63■□□□□ 0.09
Tpm1P58771 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tpm1P58771 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.62■□□□□ 0.09
Tpm1P58771 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tpm1P58771 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms