Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdh11P55288 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdh11P55288 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cdh11P55288 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdh11P55288 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh11P55288 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh11P55288 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Cdh11P55288 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh11P55288 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdh11P55288 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh11P55288 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh11P55288 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh11P55288 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh11P55288 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdh11P55288 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh11P55288 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Gm14042-201ENSMUST00000120139 833 ntBASIC12.79□□□□□ -0.36
Cdh11P55288 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cdh11P55288 Gm7774-201ENSMUST00000200064 533 ntBASIC12.79□□□□□ -0.36
Cdh11P55288 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cdh11P55288 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdh11P55288 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.79□□□□□ -0.36
Cdh11P55288 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cdh11P55288 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.79□□□□□ -0.36
Cdh11P55288 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh11P55288 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh11P55288 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.78□□□□□ -0.36
Cdh11P55288 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdh11P55288 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh11P55288 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.78□□□□□ -0.36
Cdh11P55288 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh11P55288 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
Cdh11P55288 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cdh11P55288 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.78□□□□□ -0.36
Cdh11P55288 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.78□□□□□ -0.36
Cdh11P55288 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cdh11P55288 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.78□□□□□ -0.36
Cdh11P55288 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.78□□□□□ -0.36
Cdh11P55288 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cdh11P55288 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms