Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm46209-201ENSMUST00000217912 553 ntBASIC15.1■□□□□ 0.01
Nub1P54729 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.1■□□□□ 0.01
Nub1P54729 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.1■□□□□ 0.01
Nub1P54729 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nub1P54729 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nub1P54729 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Nub1P54729 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.09■□□□□ 0.01
Nub1P54729 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Gm15653-201ENSMUST00000119247 907 ntBASIC15.09■□□□□ 0.01
Nub1P54729 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Nub1P54729 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.09■□□□□ 0.01
Nub1P54729 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Gm27680-201ENSMUST00000184192 160 ntBASIC15.09■□□□□ 0.01
Nub1P54729 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.09■□□□□ 0.01
Nub1P54729 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.09■□□□□ 0.01
Nub1P54729 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Nub1P54729 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nub1P54729 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nub1P54729 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Nub1P54729 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nub1P54729 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Nub1P54729 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nub1P54729 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nub1P54729 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nub1P54729 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nub1P54729 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Gm14767-201ENSMUST00000121559 586 ntBASIC15.08■□□□□ 0
Nub1P54729 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Nub1P54729 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.08■□□□□ 0
Nub1P54729 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.08■□□□□ 0
Nub1P54729 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nub1P54729 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Nub1P54729 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.08■□□□□ 0
Nub1P54729 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Nub1P54729 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nub1P54729 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nub1P54729 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.07■□□□□ 0
Nub1P54729 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nub1P54729 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms