Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh6P54276 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Msh6P54276 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Msh6P54276 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh6P54276 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.64■□□□□ 0.41
Msh6P54276 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh6P54276 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.64■□□□□ 0.41
Msh6P54276 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.64■□□□□ 0.41
Msh6P54276 Gm24644-201ENSMUST00000157114 139 ntBASIC17.64■□□□□ 0.41
Msh6P54276 Gm24420-201ENSMUST00000176676 59 ntBASIC17.64■□□□□ 0.41
Msh6P54276 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.64■□□□□ 0.41
Msh6P54276 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.64■□□□□ 0.41
Msh6P54276 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Msh6P54276 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.64■□□□□ 0.41
Msh6P54276 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Msh6P54276 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh6P54276 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Msh6P54276 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.63■□□□□ 0.41
Msh6P54276 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Msh6P54276 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Gm27772-201ENSMUST00000184900 187 ntBASIC17.63■□□□□ 0.41
Msh6P54276 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.63■□□□□ 0.41
Msh6P54276 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh6P54276 Gm18054-201ENSMUST00000207539 555 ntBASIC17.63■□□□□ 0.41
Msh6P54276 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.63■□□□□ 0.41
Msh6P54276 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Msh6P54276 Olfr582-201ENSMUST00000098212 960 ntBASIC17.63■□□□□ 0.41
Msh6P54276 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Msh6P54276 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Msh6P54276 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.62■□□□□ 0.41
Msh6P54276 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.62■□□□□ 0.41
Msh6P54276 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh6P54276 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh6P54276 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.62■□□□□ 0.41
Msh6P54276 Gm44397-201ENSMUST00000195950 113 ntBASIC17.62■□□□□ 0.41
Msh6P54276 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.62■□□□□ 0.41
Msh6P54276 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh6P54276 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.62■□□□□ 0.41
Msh6P54276 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.62■□□□□ 0.41
Msh6P54276 Gm8598-201ENSMUST00000221184 836 ntBASIC17.62■□□□□ 0.41
Msh6P54276 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.62■□□□□ 0.41
Msh6P54276 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.62■□□□□ 0.41
Msh6P54276 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Msh6P54276 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Msh6P54276 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.61■□□□□ 0.41
Msh6P54276 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.61■□□□□ 0.41
Msh6P54276 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.61■□□□□ 0.41
Msh6P54276 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Msh6P54276 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms