Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.24□□□□□ -0.13
Sox1P53783 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Gm19208-201ENSMUST00000213861 912 ntBASIC14.24□□□□□ -0.13
Sox1P53783 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.24□□□□□ -0.13
Sox1P53783 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox1P53783 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Sox1P53783 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.24□□□□□ -0.13
Sox1P53783 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox1P53783 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox1P53783 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Sox1P53783 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sox1P53783 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Gm11331-201ENSMUST00000119764 288 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Gm13813-201ENSMUST00000120998 787 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Gm13385-201ENSMUST00000121089 220 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.23□□□□□ -0.13
Sox1P53783 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Gm37835-201ENSMUST00000193305 361 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Gm42790-201ENSMUST00000201268 969 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.23□□□□□ -0.13
Sox1P53783 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.23□□□□□ -0.13
Sox1P53783 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.23□□□□□ -0.13
Sox1P53783 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sox1P53783 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox1P53783 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox1P53783 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox1P53783 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox1P53783 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Gm12882-201ENSMUST00000121696 517 ntBASIC14.22□□□□□ -0.13
Sox1P53783 Gm12134-201ENSMUST00000122109 520 ntBASIC14.22□□□□□ -0.13
Sox1P53783 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sox1P53783 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Mir6927-201ENSMUST00000184494 71 ntBASIC14.22□□□□□ -0.13
Sox1P53783 Gm7467-201ENSMUST00000185173 652 ntBASIC14.22□□□□□ -0.13
Sox1P53783 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox1P53783 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.22□□□□□ -0.13
Sox1P53783 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox1P53783 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox1P53783 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sox1P53783 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox1P53783 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox1P53783 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox1P53783 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox1P53783 Gm24830-201ENSMUST00000102024 166 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Gm14277-201ENSMUST00000121195 360 ntBASIC14.21□□□□□ -0.13
Sox1P53783 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms