Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prox1P48437 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.48□□□□□ -0.25
Prox1P48437 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.48□□□□□ -0.25
Prox1P48437 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Gm2272-201ENSMUST00000194903 582 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Gm2451-201ENSMUST00000199447 999 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Gm10290-201ENSMUST00000200451 999 ntBASIC13.48□□□□□ -0.25
Prox1P48437 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.48□□□□□ -0.25
Prox1P48437 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.48□□□□□ -0.25
Prox1P48437 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Prox1P48437 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.48□□□□□ -0.25
Prox1P48437 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Prox1P48437 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Prox1P48437 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prox1P48437 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Prox1P48437 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.47□□□□□ -0.25
Prox1P48437 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Prox1P48437 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.47□□□□□ -0.25
Prox1P48437 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Mir5131-201ENSMUST00000175426 93 ntBASIC13.47□□□□□ -0.25
Prox1P48437 Gm37935-201ENSMUST00000192012 982 ntBASIC13.47□□□□□ -0.25
Prox1P48437 Olfr286-202ENSMUST00000205305 969 ntBASIC13.47□□□□□ -0.25
Prox1P48437 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.47□□□□□ -0.25
Prox1P48437 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prox1P48437 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Prox1P48437 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Prox1P48437 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Prox1P48437 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.46□□□□□ -0.25
Prox1P48437 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.46□□□□□ -0.25
Prox1P48437 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.46□□□□□ -0.25
Prox1P48437 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Prox1P48437 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.46□□□□□ -0.25
Prox1P48437 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Prox1P48437 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.46□□□□□ -0.25
Prox1P48437 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Prox1P48437 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms