Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nkx2-6P43688 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.26□□□□□ -0.29
Nkx2-6P43688 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Mir7654-201ENSMUST00000185082 70 ntBASIC13.26□□□□□ -0.29
Nkx2-6P43688 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.26□□□□□ -0.29
Nkx2-6P43688 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.26□□□□□ -0.29
Nkx2-6P43688 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Nkx2-6P43688 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.25□□□□□ -0.29
Nkx2-6P43688 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.25□□□□□ -0.29
Nkx2-6P43688 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gm15240-201ENSMUST00000118156 720 ntBASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gm12341-201ENSMUST00000119724 503 ntBASIC13.25□□□□□ -0.29
Nkx2-6P43688 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.25□□□□□ -0.29
Nkx2-6P43688 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.25□□□□□ -0.29
Nkx2-6P43688 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Nkx2-6P43688 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.24□□□□□ -0.29
Nkx2-6P43688 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.24□□□□□ -0.29
Nkx2-6P43688 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms