Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Efs-202ENSMUST00000227037 2540 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Gm12384-201ENSMUST00000119228 919 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Gm15429-201ENSMUST00000151268 798 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm3961-201ENSMUST00000204425 994 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm5425-201ENSMUST00000214125 459 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox18P43680 AC155266.1-201ENSMUST00000220762 904 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC13.47□□□□□ -0.25
Sox18P43680 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.47□□□□□ -0.25
Sox18P43680 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.47□□□□□ -0.25
Sox18P43680 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.47□□□□□ -0.25
Sox18P43680 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sox18P43680 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sox18P43680 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Sox18P43680 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.46□□□□□ -0.25
Sox18P43680 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox18P43680 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox18P43680 Gm12928-201ENSMUST00000117115 573 ntBASIC13.46□□□□□ -0.25
Sox18P43680 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.46□□□□□ -0.25
Sox18P43680 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox18P43680 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox18P43680 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.46□□□□□ -0.25
Sox18P43680 Gm4857-201ENSMUST00000192718 785 ntBASIC13.46□□□□□ -0.25
Sox18P43680 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.46□□□□□ -0.25
Sox18P43680 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox18P43680 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.46□□□□□ -0.25
Sox18P43680 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sox18P43680 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Sox18P43680 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox18P43680 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sox18P43680 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.46□□□□□ -0.26
Sox18P43680 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.45□□□□□ -0.26
Sox18P43680 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Gm8749-201ENSMUST00000117737 331 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Gm4804-201ENSMUST00000182234 999 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Gm43822-201ENSMUST00000200285 476 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Gm3786-201ENSMUST00000202659 378 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Gm40466-201ENSMUST00000212174 422 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Gm35638-201ENSMUST00000220724 652 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.45□□□□□ -0.26
Sox18P43680 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Sox18P43680 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sox18P43680 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms