Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.57□□□□□ -0.08
HttP42859 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HttP42859 Gm5781-201ENSMUST00000219792 443 ntBASIC14.57□□□□□ -0.08
HttP42859 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HttP42859 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HttP42859 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.57□□□□□ -0.08
HttP42859 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.57□□□□□ -0.08
HttP42859 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.57□□□□□ -0.08
HttP42859 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HttP42859 Gm13047-201ENSMUST00000117116 815 ntBASIC14.57□□□□□ -0.08
HttP42859 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.57□□□□□ -0.08
HttP42859 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.57□□□□□ -0.08
HttP42859 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HttP42859 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.57□□□□□ -0.08
HttP42859 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HttP42859 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
HttP42859 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.57□□□□□ -0.08
HttP42859 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.57□□□□□ -0.08
HttP42859 Gm8365-201ENSMUST00000197334 648 ntBASIC14.57□□□□□ -0.08
HttP42859 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.57□□□□□ -0.08
HttP42859 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.57□□□□□ -0.08
HttP42859 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.57□□□□□ -0.08
HttP42859 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HttP42859 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Gm11531-201ENSMUST00000117614 555 ntBASIC14.56□□□□□ -0.08
HttP42859 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HttP42859 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Gm45224-201ENSMUST00000208203 414 ntBASIC14.56□□□□□ -0.08
HttP42859 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.56□□□□□ -0.08
HttP42859 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.56□□□□□ -0.08
HttP42859 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.56□□□□□ -0.08
HttP42859 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HttP42859 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
HttP42859 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
HttP42859 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.56□□□□□ -0.08
HttP42859 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HttP42859 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.55□□□□□ -0.08
HttP42859 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
HttP42859 Gm7600-201ENSMUST00000209657 785 ntBASIC14.55□□□□□ -0.08
HttP42859 Gm17330-201ENSMUST00000221047 165 ntBASIC14.55□□□□□ -0.08
HttP42859 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HttP42859 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.55□□□□□ -0.08
HttP42859 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
HttP42859 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.55□□□□□ -0.08
HttP42859 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.55□□□□□ -0.08
HttP42859 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
HttP42859 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.55□□□□□ -0.08
HttP42859 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HttP42859 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.55□□□□□ -0.08
HttP42859 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HttP42859 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms