Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.76□□□□□ -0.53
Hmx3P42581 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.76□□□□□ -0.53
Hmx3P42581 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hmx3P42581 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hmx3P42581 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hmx3P42581 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hmx3P42581 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hmx3P42581 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hmx3P42581 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.75□□□□□ -0.53
Hmx3P42581 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.75□□□□□ -0.53
Hmx3P42581 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.75□□□□□ -0.53
Hmx3P42581 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.75□□□□□ -0.53
Hmx3P42581 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.75□□□□□ -0.53
Hmx3P42581 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.75□□□□□ -0.53
Hmx3P42581 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmx3P42581 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Hmx3P42581 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hmx3P42581 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmx3P42581 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hmx3P42581 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmx3P42581 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hmx3P42581 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmx3P42581 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmx3P42581 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.74□□□□□ -0.53
Hmx3P42581 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmx3P42581 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms