Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Mir698-201ENSMUST00000102164 109 ntBASIC14.33□□□□□ -0.12
Cxcl12P40224 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm22323-201ENSMUST00000103832 109 ntBASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm24255-201ENSMUST00000104481 128 ntBASIC14.33□□□□□ -0.12
Cxcl12P40224 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm2991-201ENSMUST00000173338 480 ntBASIC14.33□□□□□ -0.12
Cxcl12P40224 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm43138-201ENSMUST00000199123 708 ntBASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.33□□□□□ -0.12
Cxcl12P40224 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cxcl12P40224 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cxcl12P40224 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm12997-201ENSMUST00000120207 640 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm25261-201ENSMUST00000157416 134 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm25668-201ENSMUST00000157700 129 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm16379-201ENSMUST00000161469 348 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm8762-201ENSMUST00000193486 339 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.32□□□□□ -0.12
Cxcl12P40224 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cxcl12P40224 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
Cxcl12P40224 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cxcl12P40224 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Gm15370-201ENSMUST00000117158 253 ntBASIC14.31□□□□□ -0.12
Cxcl12P40224 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Gm37497-201ENSMUST00000195830 798 ntBASIC14.31□□□□□ -0.12
Cxcl12P40224 Gm6082-201ENSMUST00000215204 454 ntBASIC14.31□□□□□ -0.12
Cxcl12P40224 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cxcl12P40224 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cxcl12P40224 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms