Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm43399-201ENSMUST00000202546 2374 ntBASIC20.63■□□□□ 0.89
Chd1P40201 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Gm11597-201ENSMUST00000121423 964 ntBASIC20.62■□□□□ 0.89
Chd1P40201 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC20.62■□□□□ 0.89
Chd1P40201 AC123665.1-201ENSMUST00000228204 438 ntBASIC20.62■□□□□ 0.89
Chd1P40201 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 CU062626.3-201ENSMUST00000225522 1411 ntBASIC20.62■□□□□ 0.89
Chd1P40201 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Chd1P40201 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Chd1P40201 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1P40201 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd1P40201 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC20.61■□□□□ 0.89
Chd1P40201 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Camk2g-217ENSMUST00000226630 1937 ntBASIC20.61■□□□□ 0.89
Chd1P40201 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd1P40201 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd1P40201 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC20.61■□□□□ 0.89
Chd1P40201 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC20.61■□□□□ 0.89
Chd1P40201 Gm10051-201ENSMUST00000145209 414 ntBASIC20.61■□□□□ 0.89
Chd1P40201 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC20.61■□□□□ 0.89
Chd1P40201 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 AC122876.1-201ENSMUST00000217619 825 ntBASIC20.61■□□□□ 0.89
Chd1P40201 Dhrs4-202ENSMUST00000226168 828 ntBASIC20.61■□□□□ 0.89
Chd1P40201 AC154276.3-201ENSMUST00000227643 998 ntBASIC20.61■□□□□ 0.89
Chd1P40201 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1P40201 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
Chd1P40201 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Chd1P40201 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chd1P40201 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC20.6■□□□□ 0.89
Chd1P40201 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC20.6■□□□□ 0.89
Chd1P40201 Mir6958-201ENSMUST00000184207 73 ntBASIC20.6■□□□□ 0.89
Chd1P40201 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chd1P40201 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chd1P40201 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1P40201 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Chd1P40201 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Chd1P40201 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chd1P40201 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chd1P40201 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Chd1P40201 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd1P40201 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1P40201 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Gm26361-201ENSMUST00000158868 186 ntBASIC20.58■□□□□ 0.89
Chd1P40201 AC125486.1-201ENSMUST00000218701 320 ntBASIC20.58■□□□□ 0.89
Chd1P40201 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.58■□□□□ 0.89
Chd1P40201 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1P40201 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1P40201 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Chd1P40201 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms