Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm8000-201ENSMUST00000188378 592 ntBASIC14.13□□□□□ -0.15
Fen1P39749 Gm5364-201ENSMUST00000216789 889 ntBASIC14.13□□□□□ -0.15
Fen1P39749 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.13□□□□□ -0.15
Fen1P39749 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.13□□□□□ -0.15
Fen1P39749 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.13□□□□□ -0.15
Fen1P39749 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fen1P39749 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Fen1P39749 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.12□□□□□ -0.15
Fen1P39749 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Gm12350-201ENSMUST00000121208 462 ntBASIC14.12□□□□□ -0.15
Fen1P39749 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.12□□□□□ -0.15
Fen1P39749 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Gm9182-201ENSMUST00000217829 639 ntBASIC14.12□□□□□ -0.15
Fen1P39749 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.12□□□□□ -0.15
Fen1P39749 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
Fen1P39749 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fen1P39749 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.11□□□□□ -0.15
Fen1P39749 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.11□□□□□ -0.15
Fen1P39749 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Fen1P39749 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.11□□□□□ -0.15
Fen1P39749 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Mir5126-201ENSMUST00000175513 77 ntBASIC14.11□□□□□ -0.15
Fen1P39749 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.11□□□□□ -0.15
Fen1P39749 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.11□□□□□ -0.15
Fen1P39749 Gm10154-201ENSMUST00000084445 354 ntBASIC14.11□□□□□ -0.15
Fen1P39749 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Fen1P39749 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fen1P39749 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Fen1P39749 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Fen1P39749 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fen1P39749 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms