Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk2P38575 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Upk2P38575 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Upk2P38575 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Upk2P38575 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk2P38575 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk2P38575 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.31□□□□□ -0.44
Upk2P38575 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Gm14701-201ENSMUST00000117156 348 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk2P38575 Gm25144-201ENSMUST00000179561 110 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Gm25352-201ENSMUST00000179815 110 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Gm27430-201ENSMUST00000184585 107 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Gm37714-201ENSMUST00000194742 342 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Gm44333-201ENSMUST00000197168 107 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Upk2P38575 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk2P38575 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.31□□□□□ -0.44
Upk2P38575 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.31□□□□□ -0.44
Upk2P38575 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Upk2P38575 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Upk2P38575 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Upk2P38575 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Mir1897-201ENSMUST00000122581 272 ntBASIC12.3□□□□□ -0.44
Upk2P38575 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Gm2445-201ENSMUST00000182798 989 ntBASIC12.3□□□□□ -0.44
Upk2P38575 Gm27533-201ENSMUST00000183800 152 ntBASIC12.3□□□□□ -0.44
Upk2P38575 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk2P38575 Shd-206ENSMUST00000225145 998 ntBASIC12.3□□□□□ -0.44
Upk2P38575 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk2P38575 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.3□□□□□ -0.44
Upk2P38575 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Upk2P38575 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk2P38575 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms