Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HmgclP38060 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HmgclP38060 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HmgclP38060 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HmgclP38060 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Gm15393-201ENSMUST00000120499 219 ntBASIC13.82□□□□□ -0.2
HmgclP38060 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HmgclP38060 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Gm2445-201ENSMUST00000182798 989 ntBASIC13.82□□□□□ -0.2
HmgclP38060 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Gm44872-201ENSMUST00000207864 420 ntBASIC13.82□□□□□ -0.2
HmgclP38060 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Gm9063-201ENSMUST00000223299 582 ntBASIC13.82□□□□□ -0.2
HmgclP38060 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HmgclP38060 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HmgclP38060 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.81□□□□□ -0.2
HmgclP38060 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Gm12585-201ENSMUST00000117307 290 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Gm15920-201ENSMUST00000118998 402 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HmgclP38060 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Gm27306-201ENSMUST00000183970 107 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HmgclP38060 Gm7775-201ENSMUST00000218871 853 ntBASIC13.81□□□□□ -0.2
HmgclP38060 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HmgclP38060 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.81□□□□□ -0.2
HmgclP38060 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HmgclP38060 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.8□□□□□ -0.2
HmgclP38060 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.8□□□□□ -0.2
HmgclP38060 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Gm4804-201ENSMUST00000182234 999 ntBASIC13.8□□□□□ -0.2
HmgclP38060 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.8□□□□□ -0.2
HmgclP38060 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms