Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfc1P35601 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rfc1P35601 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfc1P35601 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfc1P35601 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Gm28659-201ENSMUST00000188013 759 ntBASIC14.78□□□□□ -0.04
Rfc1P35601 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Rfc1P35601 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfc1P35601 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rfc1P35601 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rfc1P35601 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.78□□□□□ -0.04
Rfc1P35601 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfc1P35601 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Rfc1P35601 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfc1P35601 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Rfc1P35601 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.77□□□□□ -0.05
Rfc1P35601 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Rfc1P35601 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.77□□□□□ -0.05
Rfc1P35601 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Rfc1P35601 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfc1P35601 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.77□□□□□ -0.05
Rfc1P35601 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Rfc1P35601 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rfc1P35601 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfc1P35601 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.77□□□□□ -0.05
Rfc1P35601 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfc1P35601 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rfc1P35601 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rfc1P35601 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfc1P35601 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfc1P35601 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfc1P35601 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.76□□□□□ -0.05
Rfc1P35601 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
Rfc1P35601 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Rfc1P35601 AV026068-213ENSMUST00000223675 1171 ntBASIC14.76□□□□□ -0.05
Rfc1P35601 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfc1P35601 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rfc1P35601 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rfc1P35601 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfc1P35601 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.75□□□□□ -0.05
Rfc1P35601 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rfc1P35601 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rfc1P35601 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms