Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Slc6a1P31648 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Slc6a1P31648 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.07□□□□□ -0.48
Slc6a1P31648 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.07□□□□□ -0.48
Slc6a1P31648 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Slc6a1P31648 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Slc6a1P31648 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm13036-201ENSMUST00000117799 748 ntBASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm14140-201ENSMUST00000119999 995 ntBASIC12.06□□□□□ -0.48
Slc6a1P31648 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm37935-201ENSMUST00000192012 982 ntBASIC12.06□□□□□ -0.48
Slc6a1P31648 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.06□□□□□ -0.48
Slc6a1P31648 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.06□□□□□ -0.48
Slc6a1P31648 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.06□□□□□ -0.48
Slc6a1P31648 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.06□□□□□ -0.48
Slc6a1P31648 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Slc6a1P31648 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Slc6a1P31648 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Slc6a1P31648 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms