Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Gm27892-201ENSMUST00000185017 106 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.97□□□□□ -0.01
Mmp3P28862 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Mmp3P28862 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Mmp3P28862 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.97□□□□□ -0.01
Mmp3P28862 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Mmp3P28862 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Mmp3P28862 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Mmp3P28862 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.97□□□□□ -0.01
Mmp3P28862 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.96□□□□□ -0.01
Mmp3P28862 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.96□□□□□ -0.01
Mmp3P28862 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.96□□□□□ -0.01
Mmp3P28862 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Gm15429-201ENSMUST00000151268 798 ntBASIC14.96□□□□□ -0.01
Mmp3P28862 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Mmp3P28862 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Gm6244-201ENSMUST00000178732 841 ntBASIC14.96□□□□□ -0.01
Mmp3P28862 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.96□□□□□ -0.01
Mmp3P28862 Gm6266-201ENSMUST00000203844 806 ntBASIC14.96□□□□□ -0.01
Mmp3P28862 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.96□□□□□ -0.01
Mmp3P28862 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Mmp3P28862 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp3P28862 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp3P28862 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp3P28862 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Mmp3P28862 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Mmp3P28862 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.95□□□□□ -0.02
Mmp3P28862 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Mmp3P28862 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.95□□□□□ -0.02
Mmp3P28862 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Mmp3P28862 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Gm13689-201ENSMUST00000119360 685 ntBASIC14.95□□□□□ -0.02
Mmp3P28862 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Mmp3P28862 Gm8463-201ENSMUST00000208573 613 ntBASIC14.95□□□□□ -0.02
Mmp3P28862 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Mmp3P28862 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Mmp3P28862 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Mmp3P28862 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Mmp3P28862 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.95□□□□□ -0.02
Mmp3P28862 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.95□□□□□ -0.02
Mmp3P28862 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Mmp3P28862 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp3P28862 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Mmp3P28862 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms