Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Col8a2P25318 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.71□□□□□ -0.53
Col8a2P25318 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.71□□□□□ -0.53
Col8a2P25318 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.71□□□□□ -0.53
Col8a2P25318 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Col8a2P25318 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
Col8a2P25318 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Col8a2P25318 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Col8a2P25318 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.71□□□□□ -0.54
Col8a2P25318 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Col8a2P25318 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Col8a2P25318 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.7□□□□□ -0.54
Col8a2P25318 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Col8a2P25318 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.7□□□□□ -0.54
Col8a2P25318 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.7□□□□□ -0.54
Col8a2P25318 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.7□□□□□ -0.54
Col8a2P25318 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col8a2P25318 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Col8a2P25318 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Col8a2P25318 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Col8a2P25318 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Col8a2P25318 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Col8a2P25318 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Gm5745-201ENSMUST00000183748 313 ntBASIC11.69□□□□□ -0.54
Col8a2P25318 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.69□□□□□ -0.54
Col8a2P25318 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.69□□□□□ -0.54
Col8a2P25318 Gm18027-201ENSMUST00000218947 619 ntBASIC11.69□□□□□ -0.54
Col8a2P25318 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col8a2P25318 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col8a2P25318 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col8a2P25318 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms