Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.33■□□□□ 0.04
Pde6bP23440 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.33■□□□□ 0.04
Pde6bP23440 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.33■□□□□ 0.04
Pde6bP23440 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.33■□□□□ 0.04
Pde6bP23440 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.33■□□□□ 0.04
Pde6bP23440 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pde6bP23440 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pde6bP23440 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.32■□□□□ 0.04
Pde6bP23440 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pde6bP23440 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pde6bP23440 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Gm12882-201ENSMUST00000121696 517 ntBASIC15.32■□□□□ 0.04
Pde6bP23440 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.32■□□□□ 0.04
Pde6bP23440 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.32■□□□□ 0.04
Pde6bP23440 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.32■□□□□ 0.04
Pde6bP23440 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.32■□□□□ 0.04
Pde6bP23440 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pde6bP23440 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pde6bP23440 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6bP23440 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Pde6bP23440 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pde6bP23440 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.31■□□□□ 0.04
Pde6bP23440 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.31■□□□□ 0.04
Pde6bP23440 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.31■□□□□ 0.04
Pde6bP23440 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.31■□□□□ 0.04
Pde6bP23440 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.31■□□□□ 0.04
Pde6bP23440 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pde6bP23440 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6bP23440 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Pde6bP23440 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6bP23440 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.3■□□□□ 0.04
Pde6bP23440 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pde6bP23440 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6bP23440 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6bP23440 Carlr-201ENSMUST00000181515 2574 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms