Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.81■□□□□ 0.44
Prim1P20664 Gm8584-201ENSMUST00000171982 758 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Gm8602-201ENSMUST00000184045 607 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Gm18187-201ENSMUST00000196476 984 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 Gm5035-201ENSMUST00000215581 927 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.81■□□□□ 0.44
Prim1P20664 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.81■□□□□ 0.44
Prim1P20664 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Prim1P20664 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Prim1P20664 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prim1P20664 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Prim1P20664 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prim1P20664 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prim1P20664 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.8■□□□□ 0.44
Prim1P20664 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Gm24420-201ENSMUST00000176676 59 ntBASIC17.8■□□□□ 0.44
Prim1P20664 Gm29741-201ENSMUST00000192667 421 ntBASIC17.8■□□□□ 0.44
Prim1P20664 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prim1P20664 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.8■□□□□ 0.44
Prim1P20664 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Prim1P20664 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prim1P20664 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.8■□□□□ 0.44
Prim1P20664 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Prim1P20664 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Prim1P20664 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.79■□□□□ 0.44
Prim1P20664 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Prim1P20664 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Prim1P20664 Gm11524-201ENSMUST00000119349 807 ntBASIC17.79■□□□□ 0.44
Prim1P20664 Gm13689-201ENSMUST00000119360 685 ntBASIC17.79■□□□□ 0.44
Prim1P20664 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.79■□□□□ 0.44
Prim1P20664 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gm26464-201ENSMUST00000157094 305 ntBASIC17.79■□□□□ 0.44
Prim1P20664 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gm22993-201ENSMUST00000175423 254 ntBASIC17.79■□□□□ 0.44
Prim1P20664 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.79■□□□□ 0.44
Prim1P20664 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Prim1P20664 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Prim1P20664 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.79■□□□□ 0.44
Prim1P20664 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.79■□□□□ 0.44
Prim1P20664 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prim1P20664 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.78■□□□□ 0.44
Prim1P20664 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.78■□□□□ 0.44
Prim1P20664 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.78■□□□□ 0.44
Prim1P20664 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prim1P20664 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms