Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Gm13123-201ENSMUST00000122173 492 ntBASIC10.67□□□□□ -0.7
Fn1P11276 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Fn1P11276 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Mir6958-201ENSMUST00000184207 73 ntBASIC10.67□□□□□ -0.7
Fn1P11276 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.67□□□□□ -0.7
Fn1P11276 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Fn1P11276 Gm44967-201ENSMUST00000207047 631 ntBASIC10.67□□□□□ -0.7
Fn1P11276 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Fn1P11276 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fn1P11276 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Fn1P11276 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.66□□□□□ -0.7
Fn1P11276 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Fn1P11276 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 Gm30285-201ENSMUST00000214614 422 ntBASIC10.66□□□□□ -0.7
Fn1P11276 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Fn1P11276 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Gm14665-201ENSMUST00000122294 557 ntBASIC10.66□□□□□ -0.7
Fn1P11276 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Fn1P11276 Gm15276-201ENSMUST00000145953 498 ntBASIC10.66□□□□□ -0.7
Fn1P11276 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Fn1P11276 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.66□□□□□ -0.7
Fn1P11276 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.66□□□□□ -0.7
Fn1P11276 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Fn1P11276 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Fn1P11276 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.65□□□□□ -0.7
Fn1P11276 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.65□□□□□ -0.7
Fn1P11276 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Gm29608-201ENSMUST00000190444 463 ntBASIC10.65□□□□□ -0.7
Fn1P11276 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Fn1P11276 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.65□□□□□ -0.7
Fn1P11276 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.65□□□□□ -0.7
Fn1P11276 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Fn1P11276 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.65□□□□□ -0.7
Fn1P11276 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Fn1P11276 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
Fn1P11276 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.65□□□□□ -0.7
Fn1P11276 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Fn1P11276 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms