Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.19□□□□□ -0.46
PtcraP0C6B2 Gm27306-201ENSMUST00000183970 107 ntBASIC12.19□□□□□ -0.46
PtcraP0C6B2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Gm21470-201ENSMUST00000187680 696 ntBASIC12.19□□□□□ -0.46
PtcraP0C6B2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
PtcraP0C6B2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.18□□□□□ -0.46
PtcraP0C6B2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.18□□□□□ -0.46
PtcraP0C6B2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gm15393-201ENSMUST00000120499 219 ntBASIC12.18□□□□□ -0.46
PtcraP0C6B2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.18□□□□□ -0.46
PtcraP0C6B2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
PtcraP0C6B2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.17□□□□□ -0.46
PtcraP0C6B2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PtcraP0C6B2 Gm13223-201ENSMUST00000118609 747 ntBASIC12.17□□□□□ -0.46
PtcraP0C6B2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms