Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sod1P08228 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Gm5370-201ENSMUST00000187187 574 ntBASIC13.08□□□□□ -0.32
Sod1P08228 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.08□□□□□ -0.32
Sod1P08228 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.08□□□□□ -0.32
Sod1P08228 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Sod1P08228 Gm29705-201ENSMUST00000212598 474 ntBASIC13.08□□□□□ -0.32
Sod1P08228 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.08□□□□□ -0.32
Sod1P08228 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sod1P08228 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.08□□□□□ -0.32
Sod1P08228 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.08□□□□□ -0.32
Sod1P08228 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sod1P08228 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.07□□□□□ -0.32
Sod1P08228 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Sod1P08228 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.07□□□□□ -0.32
Sod1P08228 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.07□□□□□ -0.32
Sod1P08228 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sod1P08228 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sod1P08228 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.07□□□□□ -0.32
Sod1P08228 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.07□□□□□ -0.32
Sod1P08228 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sod1P08228 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.07□□□□□ -0.32
Sod1P08228 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.07□□□□□ -0.32
Sod1P08228 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.07□□□□□ -0.32
Sod1P08228 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.07□□□□□ -0.32
Sod1P08228 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.07□□□□□ -0.32
Sod1P08228 Itm2b-204ENSMUST00000228637 783 ntBASIC13.07□□□□□ -0.32
Sod1P08228 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sod1P08228 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sod1P08228 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sod1P08228 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Sod1P08228 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sod1P08228 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.07□□□□□ -0.32
Sod1P08228 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.07□□□□□ -0.32
Sod1P08228 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sod1P08228 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Sod1P08228 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sod1P08228 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sod1P08228 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Sod1P08228 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.06□□□□□ -0.32
Sod1P08228 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.06□□□□□ -0.32
Sod1P08228 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sod1P08228 Gm27572-201ENSMUST00000183702 255 ntBASIC13.06□□□□□ -0.32
Sod1P08228 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms