Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ApoeP08226 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.28□□□□□ -0.28
ApoeP08226 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ApoeP08226 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.28□□□□□ -0.28
ApoeP08226 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ApoeP08226 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ApoeP08226 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.27□□□□□ -0.29
ApoeP08226 Gm10060-201ENSMUST00000212002 111 ntBASIC13.27□□□□□ -0.29
ApoeP08226 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.27□□□□□ -0.29
ApoeP08226 Thap2-203ENSMUST00000218989 527 ntBASIC13.27□□□□□ -0.29
ApoeP08226 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.27□□□□□ -0.29
ApoeP08226 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
ApoeP08226 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.27□□□□□ -0.29
ApoeP08226 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ApoeP08226 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ApoeP08226 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.26□□□□□ -0.29
ApoeP08226 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Ank2-226ENSMUST00000189368 339 ntBASIC13.26□□□□□ -0.29
ApoeP08226 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ApoeP08226 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms