Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.19□□□□□ -0.14
PdgfrbP05622 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.19□□□□□ -0.14
PdgfrbP05622 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PdgfrbP05622 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PdgfrbP05622 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.19□□□□□ -0.14
PdgfrbP05622 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PdgfrbP05622 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.18□□□□□ -0.14
PdgfrbP05622 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PdgfrbP05622 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PdgfrbP05622 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PdgfrbP05622 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PdgfrbP05622 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.17□□□□□ -0.14
PdgfrbP05622 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.17□□□□□ -0.14
PdgfrbP05622 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.17□□□□□ -0.14
PdgfrbP05622 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.17□□□□□ -0.14
PdgfrbP05622 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PdgfrbP05622 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.17□□□□□ -0.14
PdgfrbP05622 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PdgfrbP05622 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PdgfrbP05622 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
PdgfrbP05622 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PdgfrbP05622 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PdgfrbP05622 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PdgfrbP05622 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms