Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.55□□□□□ -0.08
P04214 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04214 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
P04214 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
P04214 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
P04214 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
P04214 Gm26083-201ENSMUST00000157904 193 ntBASIC14.54□□□□□ -0.08
P04214 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.54□□□□□ -0.08
P04214 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.54□□□□□ -0.08
P04214 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.54□□□□□ -0.08
P04214 Gm26461-201ENSMUST00000175064 290 ntBASIC14.54□□□□□ -0.08
P04214 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.54□□□□□ -0.08
P04214 Gm37922-201ENSMUST00000195596 455 ntBASIC14.54□□□□□ -0.08
P04214 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.54□□□□□ -0.08
P04214 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.54□□□□□ -0.08
P04214 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.54□□□□□ -0.08
P04214 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04214 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.53□□□□□ -0.08
P04214 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.53□□□□□ -0.08
P04214 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.53□□□□□ -0.08
P04214 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
P04214 Mir877-201ENSMUST00000104738 85 ntBASIC14.53□□□□□ -0.08
P04214 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.53□□□□□ -0.08
P04214 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.53□□□□□ -0.08
P04214 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.53□□□□□ -0.08
P04214 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Gm7029-201ENSMUST00000173226 450 ntBASIC14.53□□□□□ -0.08
P04214 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.53□□□□□ -0.08
P04214 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.53□□□□□ -0.08
P04214 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
P04214 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04214 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.52□□□□□ -0.08
P04214 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.52□□□□□ -0.08
P04214 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P04214 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.52□□□□□ -0.08
P04214 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
P04214 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.52□□□□□ -0.09
P04214 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.52□□□□□ -0.09
P04214 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.52□□□□□ -0.09
P04214 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
P04214 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms