Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm37922-201ENSMUST00000195596 455 ntBASIC16.94■□□□□ 0.3
Col4a1P02463 Gm6013-201ENSMUST00000212264 699 ntBASIC16.94■□□□□ 0.3
Col4a1P02463 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.94■□□□□ 0.3
Col4a1P02463 Snora73a-201ENSMUST00000082453 205 ntBASIC16.94■□□□□ 0.3
Col4a1P02463 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Gm6203-201ENSMUST00000209575 1342 ntBASIC16.93■□□□□ 0.3
Col4a1P02463 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.93■□□□□ 0.3
Col4a1P02463 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.93■□□□□ 0.3
Col4a1P02463 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Col4a1P02463 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.93■□□□□ 0.3
Col4a1P02463 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.93■□□□□ 0.3
Col4a1P02463 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Col4a1P02463 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col4a1P02463 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.93■□□□□ 0.3
Col4a1P02463 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.93■□□□□ 0.3
Col4a1P02463 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Col4a1P02463 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col4a1P02463 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col4a1P02463 Gm13350-201ENSMUST00000120519 479 ntBASIC16.92■□□□□ 0.3
Col4a1P02463 Gm25261-201ENSMUST00000157416 134 ntBASIC16.92■□□□□ 0.3
Col4a1P02463 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.92■□□□□ 0.3
Col4a1P02463 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Col4a1P02463 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.92■□□□□ 0.3
Col4a1P02463 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Col4a1P02463 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col4a1P02463 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col4a1P02463 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col4a1P02463 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Col4a1P02463 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Col4a1P02463 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col4a1P02463 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.91■□□□□ 0.3
Col4a1P02463 Gm37259-201ENSMUST00000193903 849 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 Gm6334-201ENSMUST00000207083 228 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Col4a1P02463 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.91■□□□□ 0.3
Col4a1P02463 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col4a1P02463 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Gm12134-201ENSMUST00000122109 520 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Gm37008-201ENSMUST00000195712 319 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Col4a1P02463 Olfr284-202ENSMUST00000206647 966 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col4a1P02463 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col4a1P02463 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.91■□□□□ 0.3
Col4a1P02463 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col4a1P02463 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col4a1P02463 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.9■□□□□ 0.3
Col4a1P02463 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms